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- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinFrom all over the world Brennan's former team reassembles to help Cam solve a difficult case of identifying an unknown baby's corpse, as her failure to do so may wreck her career. They soon realize this may not be just one case, but two.
- DirectorMilan CheylovStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen the remains of a couple are discovered in a cave at National Park, the team must piece together the identity of the man and the woman as well as solve the crime. After interrogating two viable suspects, the team identifies the woman as a marketing executive who also served as her partner's AA sponsor, providing clues that lead them to expose the truth. Meanwhile, Booth's girlfriend and Afghanistan war correspondent, Hannah Burley, makes a surprise visit. After meeting Burley and sensing the couple's genuine happiness, Brennan re-evaluates her own relationship with Booth, and he tries to teach her that love is not always logical.
- DirectorTim SouthamStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen Booth and Brennan are called to investigate decomposed remains found at the Jersey Shore, the team IDs the victim as Richie "The V" Genaro, a 23-year-old who partied the night before at a popular nightclub. Booth and Brennan question Genaro's peers including self proclaimed girlfriend Marie Galasso and the club bouncer, and Brennan surprisingly proves her pop culture savvy and anthropological expertise after watching what she believes to be a documentary on the inhabitants of the Jersey Shore, but was in actuality a reality show set there. Meanwhile, at the lab, the team grows fond of Booth's girlfriend, Hannah, and Angela tries to keep her pregnancy a secret
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinAfter a skull and decomposing hands are found in a dumpster, the team must not only solve the crime but also search for the rest of the victim's remains. Identified as Ray Raminsky, the victim turns out to be a bounty hunter in search of Charles Braverman, a man indicted for the murder of a co-worker. Meanwhile, Brennan is asked by Professor Bunsen Jude "The Science Dude" if he can shoot an episode of his children's show from The Jeffersonian Lab with Brennan as his special guest. Brennan initially turns him down, but is surprised when he makes her a deal she can't refuse, so she takes him on as a new "squintern." As the team pieces together the details of the crime, they discover that they are not alone in the hunt for Braverman and find themselves in a chase with an unexpected suspect.
- DirectorJeannot SzwarcStarsEmily DeschanelDavid BoreanazMichaela ConlinOn an isolated construction site, a skateboarder falls over a bump in a concrete slate - part of a young man's skull, identified from a rare dental tattoo as missing former ballet dancer Michael, who left the art to join street hip-hop art at a park with magician Johnny Wizard's informal, yet surprisingly competitive gang. The team follows a mold trace. Booth is however no less preoccupied by the safety of his lover, White House correspondent Hannah Burley, whose investigation for petty police corruption in D.C. proves physically dangerous.
- DirectorMark HelfrichStarsEmily DeschanelDavid BoreanazMichaela ConlinThe past and present collide when human remains from a 150-year-old slave ship, the Amalia Rose, surface. The team is tasked to give the deceased a proper burial but make an unforeseen discovery linked to a recent murder. In the course of the investigation, Booth and Brennan are led to a different kind of ship - a "Cougar" cruise - where they learn their victim was seen moments before his death. Meanwhile, Sweets struggles to maintain a casual relationship with Daisy, and Cam discovers a surprising and emotional connection to the Amalia Rose.
- DirectorTim SouthamStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen human remains are discovered in the world's largest chocolate bar, a "sweet" event for a candymaker quickly turns bitter. As eccentric chocolate factory owner Jimmy Walpert deals with the tragedy, the team soon discovers that the victim was a mysterious character whose past is full of secrets, lies and love affairs. Meanwhile, Cam struggles with her daughter's decision to attend a university that fails to meet her high standards, and Hodgins asks Angela to arrange a party to announce her not-so-secret pregnancy.
- DirectorGordon LonsdaleStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth and Brennan's next case leads them to a crime scene where a human carcass has literally melted into the dashboard of a charred truck. As the team investigates the case, they discover a gunshot wound in the victim, but learn that neither the fire nor the bullet was the cause of the victim's death. Additional clues lead them to a local high school where the victim's wife is a teacher. As a student-teacher relationship begins to surface and a pattern takes shape in the lab, the team is able to track down the murder weapon and solve the crime. Meanwhile, Sweets resists the temptation of allowing his feelings for Daisy to interfere with helping her pass a government psychological evaluation, and Hannah attempts to break the ice and warm up to Booth's son Parker.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinThe Jeffersonian team finds a body in a tree and Dr. Brennan discovers that the victim is practically a clone of herself.
- DirectorKate WoodsStarsEmily DeschanelDavid BoreanazMichaela ConlinAn unidentifiable body is discovered in the shower of an upscale home belonging to a young female socialite. With the help of nosy bones expert and Jeffersonian "squint" Clark Edison, skeletal reconstruction and evidence in the drain reveal that the victim was a young girl employed by a counterfeit handbag distributor. The team learns that the victim supplied counterfeit purses to her socialite acquaintance, and after interrogating the self-centered socialite and sifting through footage on a hidden camera, they discover evidence linking them to the murderer. Meanwhile, Angela and Hodgins discuss their future home and where they want to raise a family, and Booth opens up to Hannah about Brennan's feelings for him.
- DirectorDavid BoreanazStarsEmily DeschanelDavid BoreanazMichaela ConlinThe city anxiously anticipates the arrival of Heather Taffet, more notoriously known as "The Gravedigger," for her final appeal after being sentenced to death for a kidnap-murder and a series of similar coldblooded crimes. But when a bullet targeted at The Gravedigger is fired from a distance and hits her, the Jeffersonian team is tasked to piece together the sniper's precise location as well as identify the suspect and his motives. With the help of probing investigator Caroline Julian, Booth and Brennan put together a list of likely suspects, but the evidence and the remarkable skill needed to pull off the crime leads the team to believe that the crime was an inside, professional job, leaving Brennan's father Max and even Booth as plausible suspects. Meanwhile, Sweets attempts to put on a brave face after being caught in the firestorm just moments following a chilly encounter with The Gravedigger.
- DirectorRob HardyStarsEmily DeschanelDavid BoreanazMichaela ConlinA body disguised as a scarecrow is found with a bullet wound in a remote cornfield, and the team is forced to work against the clock to avoid a storm and potential complications that would affect the evidence. Booth and Brennan interrogate the victim's three wives, who are also sisters, and learn that jealousy between the sisters and their desire for their husband's attention had caused a major rift in the family. Booth and Brennan also question one relative who disapproved of the victim's polygamy. Meanwhile, Cam loses confidence in her relationship with her on-call doctor boyfriend, but they both realize they need to make their relationship a priority.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinA BMX rider's remains are discovered on the roof of a warehouse after a failed bike stunt. While Booth and Brennan interrogate the victim's fellow riders, Hodgins and newly mellowed "squint" Fisher identify the numerous fractures in the victim's skeletal structure, and Angela recreates the series of events that led to the fatal accident. Meanwhile, Sweets turns to Booth for advice about his relationship with Daisy, and Booth makes a decision about his relationship with Hannah.
- DirectorIan ToyntonStarsEmily DeschanelDavid BoreanazMichaela ConlinThe liquefied remains of a wedding planner are found in her home tanning bed on Valentine's Day, and Cam pressures her team to solve the case in time so she can celebrate the holiday with her boyfriend. While the "squints" works tirelessly in the lab, Booth and Brennan interrogate a slew of possible suspects until they unlock classified files in the victim's computer, which lead to their main suspect. Meanwhile, Booth and Brennan downplay the significance of Valentine's Day, and Hodgins tries to plan a romantic day for Angela, but "squint" Clark helps him realize that the most meaningful gifts come from the heart.
- DirectorMilan CheylovStarsEmily DeschanelDavid BoreanazMichaela ConlinAfter notoriously murdering "The Gravedigger," sniper-on-the-loose Jacob Broadsky strikes again. This time, his victim is a prior suspect who escaped the justice system. More determined than ever to catch Broadsky, Booth uses his own military training to beat the sniper at his own game. He vows to go to any lengths necessary to ensure that justice is served. In a heated and dramatic face-off, Booth has minutes to catch Broadsky before he hits an intended target, but Broadsky's skill and speed may prove to be a worthy adversary. Meanwhile, Angela's father visits the Jeffersonian and insists on naming his unborn grandchild.
- DirectorDavid BoreanazStarsEmily DeschanelDavid BoreanazMichaela ConlinA severe blizzard causes a city-wide blackout, adding to the obstacles the team must overcome in order to solve a murder case that could be linked to a potential viral outbreak. But when Booth and Brennan find themselves trapped in an elevator during the power outage, Sweets is on hand for outside assistance, but does more than what's asked of him when he initiates a touchy conversation about Booth and Brennan's relationship. Meanwhile, Angela and Hodgins get worrisome news about the health of their unborn baby, and Hodgins and "squint" Wendell Bray get creative in the lab and put their scientific skills to use to identify the victim and the rare disease.
- DirectorTimothy Van PattenStarsSteve BuscemiKelly MacdonaldMichael ShannonNucky makes peace with Masseria and Rothstein, a dalliance causes Dunn Purnsley to murder a talent agent, and Gillian tries to wrest custody of Tommy.
- DirectorAlik SakharovStarsSteve BuscemiKelly MacdonaldMichael ShannonVan Alden runs errands for O'Bannion and later for Capone. Dr. Valentin Narcisse, an educated, sophisticated thug wants retribution for the murder of Pastor.
- DirectorAllen CoulterStarsSteve BuscemiKelly MacdonaldMichael ShannonFormer bootlegger associate Bill McCoy talks Nucky into partnering with a local Tampa hood, and Narcisse attempts to come between Nunn and Chalky.
- DirectorEd BianchiStarsSteve BuscemiKelly MacdonaldMichael ShannonNucky decides not to partner with Rothstein on his Tampa operation, Narcisse recruits Dunn from Chalky, and Van Alden switches allegiance From O'Banion to Capone.
- DirectorMartin ScorseseStarsSteve BuscemiMichael PittKelly MacdonaldIn 1920 Atlantic City, politician Enoch 'Nucky' Thompson makes arrangements to operate a liquor smuggling business during the early days of Prohibition. His driver, Jimmy Darmody, wishes to prove his usefulness.
- DirectorTimothy Van PattenStarsSteve BuscemiMichael PittKelly MacdonaldThe Feds begin to look into Nucky's affairs, his brother Eli looks to buy off Mrs. Schroeder, and Nucky essentially fires Jimmy Darmody as his chauffeur.
- DirectorTimothy Van PattenStarsSteve BuscemiMichael PittKelly MacdonaldWhen a witness turns up who can link Jimmy Darmody to the woods massacre, the Feds get involved, Nucky banishes him, and Rothstein recruits Luciano to kill him.
- DirectorJeremy PodeswaStarsSteve BuscemiMichael PittKelly MacdonaldJimmy forges new relationships in Chicago; Nucky fetes a U.S. Senator; Chalky fingers a lynching suspect; Margaret and Lucy clash.
- DirectorAlan TaylorStarsSteve BuscemiMichael PittKelly MacdonaldNucky makes preparations for the annual Celtic Day dinner on St. Patrick's Day, and Jimmy tries to get Pearl through the trauma of her disfigurement with drugs,
- DirectorTimothy Van PattenStarsSteve BuscemiMichael PittKelly MacdonaldNucky investigates a boardwalk theft; Jimmy scores points with Johnny Torrio in Chicago; Margaret stands up to Lucy.
- DirectorAllen CoulterStarsSteve BuscemiMichael PittKelly MacdonaldAfter Enoch's senile father breaks a leg in his isolated house, the brothers agree that he no longer can live alone and the house should be given to a loyal employee.
- DirectorBrian KirkStarsSteve BuscemiMichael PittKelly MacdonaldNucky travels to Chicago and acts as kingmaker during the Presidential convention, but at home brother Eli is shot as a rival mob senses weakness in Thompson's operation.
- DirectorBrad AndersonStarsSteve BuscemiMichael PittKelly MacdonaldJimmy arrives from Chicago under his new agreement with Nucky to retaliate against a rival gang element but gets a chilly reception from Angela.
- DirectorSimon Cellan JonesStarsSteve BuscemiMichael PittKelly MacdonaldHarrow guards Margaret and the kids, Jimmy mistakenly thinks Mr. Dittrich is Angela's lover, and Chalky pretends to align himself with Lansky.
- DirectorAllen CoulterStarsSteve BuscemiMichael PittKelly MacdonaldVan Alland remains suspicious of Sebso, the dying Commodore seeks a rapprochements with illegitimate son Jimmy, and Margaret leaves after a domestic argument with Nucky.
- DirectorTimothy Van PattenStarsSteve BuscemiMichael PittKelly MacdonaldNucky's organizational skills are put to the test as the election approaches, his judgment's questioned as he handles the Commodore's poisoning, and he reveals his part to Margaret.
- DirectorTimothy Van PattenStarsSteve BuscemiMichael PittKelly MacdonaldConfidantes of Nucky plot against him, Gillian vies with Angela for control of the house, race relations hit a boiling point, and Van Alden celebrates his 13th anniversary.
- DirectorDavid PetrarcaStarsSteve BuscemiMichael PittKelly MacdonaldAfter Nucky is released, he finds that most of his organization have deserted him for the Commodore, Margaret keeps her head, and the IRA asks Nucky for a donation.
- DirectorSusanna WhiteStarsSteve BuscemiMichael PittKelly MacdonaldThe Commodore's faction cuts off Nucky's liquor supply as the treasurer's friends seem to be deserting him but he finds a willing ally in Owen Sleater of Sinn Fein.
- DirectorEd BianchiStarsSteve BuscemiMichael PittKelly MacdonaldWith the Commodore's Coast Guard seizing Nucky's liquor, he partners with Rothstein to bring it through Philly, but the Commodore suffers a debilitating stroke.
- DirectorTimothy Van PattenStarsSteve BuscemiMichael PittKelly MacdonaldWith the Commodore's stroke, the conspirators against Nucky realize their error and begin to make bad decisions.
- DirectorJeremy PodeswaStarsSteve BuscemiMichael PittKelly MacdonaldLucy's water breaks and labor starts; guilt overpowers Van Alden while at the hospital. Nucky's racketeering case gets sent to federal court where someone uses a New Jersey senator to pull some strings. Having reached the age of reason, Margaret's son makes his first confession, and the priest wants her to set an example; Nucky warns her not to trust the sanctity of the confessional. Owen's cheekiness seems limitless. Jimmy spots Manny's lieutenant on the boardwalk with Nucky; a series of crosses, double-crosses, and confrontations follow.
- DirectorAllen CoulterStarsSteve BuscemiMichael PittKelly MacdonaldMargaret drives to Brooklyn to see her estranged siblings but receives a cool response, Van Alden has a new boss, and the conspiracy opts to eliminate Nucky.
- DirectorTimothy Van PattenStarsSteve BuscemiMichael PittKelly MacdonaldWhen the Feds serve Eli with a subpoena, the trauma causes his father to have a heart attack, and Nucky announces to his rivals that he's retiring.
- DirectorBrad AndersonStarsSteve BuscemiMichael PittKelly MacdonaldNucky goes to Belfast and offers to trade the IRA machine guns for whiskey, Waxy Gordon plans revenge against Manny Horvitz, and Jimmy enjoys his new status as AC boss.
- DirectorJeremy PodeswaStarsSteve BuscemiMichael PittKelly MacdonaldJimmy's supporters fail to break up Chalky's strikers and negotiations fail as Margaret thinks she can buy Emily's recovery and Manny Horvitz exacts revenge.
- 2010–201458mTV-MA8.9 (2.4K)TV EpisodeDirectorAllen CoulterStarsSteve BuscemiMichael PittKelly MacdonaldJimmy's experiences at Princeton are seen in flashback, Margaret tries to deal with her guilt, and Doyle tries unsuccessfully to wheel and deal.
- DirectorTimothy Van PattenStarsSteve BuscemiMichael PittKelly MacdonaldJimmy tries to make things right with Nucky, the KKK murderers get justice, and Nucky marries Margaret to avoid her testimony at his trial.
- StarsTerence WinterMeg SteedleStephen RootMeet Gyp Rosetti (Bobby Cannavale), Billie Kent (Meg Chambers Steedle), Gaston Means (Stephen Root) and some of the other new characters popping up in Season 3 of 'Boardwalk Empire.'
- DirectorTimothy Van PattenStarsSteve BuscemiKelly MacdonaldMichael ShannonSeason 3 premiere. Nucky makes a New Year's resolution; Margaret eyes a hospital expansion; Gillian builds a new business; Van Alden calls a gangster's bluff.
- DirectorAlik SakharovStarsSteve BuscemiKelly MacdonaldMichael ShannonNucky's relationship with Billie grows as Margaret becomes involved in women's issues at the hospital. A humbled Eli is released from jail as Gyp muscles into the operation.
- DirectorJeremy PodeswaStarsSteve BuscemiKelly MacdonaldMichael ShannonGyp and his crew choke off the northbound road to New York and forces Nucky to come to an accommodation as he also tries to muscle into AC's prostitution.
- DirectorKari SkoglandStarsSteve BuscemiKelly MacdonaldMichael ShannonAfter tracking down a liquor thief, Nucky and Owen end up spending a long night hiding out from the Feds with the precocious perp. Mickey makes a routing call that will have far-reaching consequences. Capone's feud with O'Banion heats up.
- DirectorTimothy Van PattenStarsSteve BuscemiKelly MacdonaldMichael ShannonA frustrated Rothstein meets with Gyp in Tabor Heights, a paranoid Van Alden is looking over his shoulder, and Nucky goes to great length to insure success for Billie's show.
- DirectorEd BianchiStarsSteve BuscemiKelly MacdonaldMichael ShannonDaugherty's men harass Nucky on trumped up charges and he forms an alliance with Esther Randolph while the rift with Margaret grows wider.
- DirectorAllen CoulterStarsSteve BuscemiKelly MacdonaldMichael ShannonEaster Sunday allows for several families to share dinner" Nucky, Margaret and the kids with Eli, Richard with the Sagorskys, and Gyp with his wife and kids.
- DirectorTimothy Van PattenStarsSteve BuscemiKelly MacdonaldMichael ShannonGillian plots revenge for Jimmy's murder, Billie gets a screen test, and Nucky approaches cabinet secretary Andrew Mellon with an offer he can't refuse.
- DirectorEd BianchiStarsSteve BuscemiKelly MacdonaldMichael ShannonNucky is still feeling the effects of the bomb concussion as Rothstein and other allies withdraw their support while Margaret and Owen come to an understanding.
- DirectorJeremy PodeswaStarsSteve BuscemiKelly MacdonaldMichael ShannonNucky plans to whack Joe Masseria and Gyp Rosetti, Richard stands up to Julia's abusive father, and Owen and Margaret plan to run off together.
- DirectorAllen CoulterStarsSteve BuscemiKelly MacdonaldMichael ShannonAfter a dead body is delivered in a crate and Margaret leaves him, Nucky spends the next day with a seriously wounded Eddie and Gyp's thugs trying to kill him.
- DirectorTimothy Van PattenStarsSteve BuscemiKelly MacdonaldMichael ShannonAfter promising Rothstein Mellon's distillery, Masseria is persuaded to withdraw his support for Gyp, and Margaret finds an abortionist in Brooklyn.
- DirectorGreg YaitanesStarsEmily DeschanelDavid BoreanazMichaela ConlinFBI Agent Booth needs forensic anthropologist Dr. Brennan's help to solve the case of a decomposed body found in a pond in Arlington National Cemetery. She agrees to help if she is a full partner in the case.
- DirectorAllan KroekerStarsEmily DeschanelDavid BoreanazMichaela ConlinBones is called on to identify the body of a suicide bomber.
- DirectorPatrick R. NorrisStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth investigate the body of a teenager found hanging in a tree on the grounds of an exclusive private school.
- DirectorAllan KroekerStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth travel to Washington to investigate an arm found in a dead black bear.
- DirectorJesús Salvador TreviñoStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen a young boy goes missing from a mall, Bones is called in to determine if it is his body found in a nearby field.
- DirectorTawnia McKiernanStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Angela's night out goes bad when Bones kicks someone into a wall and reveals a mummified corpse and a bag of methamphetamines.
- DirectorDavid Hugh JonesStarsEmily DeschanelDavid BoreanazMichaela ConlinA condemned man's lawyer makes a last minute appeal to Bones and Booth to re-examine his case. After looking over the evidence, they determine that the man may not be guilty.
- DirectorSanford BookstaverStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth investigate a missing woman found in a fridge while Bones reconnects with her former professor.
- DirectorGreg YaitanesStarsEmily DeschanelDavid BoreanazMichaela ConlinWhile the gang is quarantined in the lab for Christmas, they search for clues to solve the mystery of a skeleton found in a fallout shelter.
- DirectorGreg YaitanesStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth travel to Los Angeles to investigate a body found on a beach. The case leads them to call girls and plastic surgeons. Back in Washington, Hodgins and Goodman clash while authenticating the remains of an Iron Age warrior.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth and Bones work quickly to solve not only a murder, but also the kidnapping of the victim's child.
- DirectorJames Whitmore Jr.StarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth investigate a body found in an alley that is dressed in a costume. The case leads them to a missing teen involved in comic books and a role playing game.
- DirectorSanford BookstaverStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and Booth investigate the body of a woman found in the car of a gang member. The case leads them to a dangerous Central American gang and a Senator.
- DirectorTony WharmbyStarsEmily DeschanelDavid BoreanazMichaela ConlinBones is told to investigate a plane crash involving Chinese delegates, but she is more interested in bone fragments from a person who was not on the plane. The fragments lead to a man whose father has been missing for five years.
- DirectorAllan KroekerStarsEmily DeschanelDavid BoreanazMichaela ConlinAfter Bones narrowly avoids being shot while on the way to a blind date, the shooter is thought to be connected to one of two murders she's investigating: one of mob boss James Cugini, the other a victim of serial killer Kevin Hollings.
- DirectorJoe NapolitanoStarsEmily DeschanelDavid BoreanazMichaela ConlinThe death of a documentary filmmaker sends Bones and Booth into the shadowy world of tunnels underneath the city.
- DirectorDonna DeitchStarsEmily DeschanelDavid BoreanazMichaela ConlinBrennan goes to help Angela when her boyfriend goes missing in the desert, and Booth gets in on the action when the sheriff won't cooperate.
- DirectorJesús Salvador TreviñoStarsEmily DeschanelDavid BoreanazMichaela ConlinAfter a dead body is found near a 300 year old finger bone, Booth and Brennan investigate the site, which might be hiding pirate treasure.
- DirectorJames Whitmore Jr.StarsEmily DeschanelDavid BoreanazMichaela ConlinBones goes to New Orleans post-Katrina and becomes involved in Voodoo guided murder.
- DirectorSanford BookstaverStarsEmily DeschanelDavid BoreanazMichaela ConlinWhile examining a young girl's cancer, Brennan and Booth uncover a bone-smuggling ring.
- DirectorJonathan PontellStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth and Brennan's investigation into the apparent suicide of a protester in Arlington National Cemetery may lead to a major military scandal.
- DirectorJesús Salvador TreviñoStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen Brennan's mother is found in the Jeffersonian's storage for unidentified remains, Booth opens an official FBI investigation to find out who killed her.
- DirectorTony WharmbyStarsEmily DeschanelDavid BoreanazMichaela ConlinAn investigation into a train wreck that claimed three lives, one of them a U.S. senator. In other events, Brennan clashes with the new boss, Dr. Camille Saroyan, who has a romantic history with Booth.
- DirectorJesús Salvador TreviñoStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth seeks out the husband of a missing pregnant woman after her remains wash up onshore, but the suspect disappears. Meanwhile, Bones continues to clash with Cam, and Booth gets a visit from his ex.
- DirectorSanford BookstaverStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen a tractor-trailer collides with a garbage truck, the skeleton of a 17-year old boy is found in the trash. A facial imprint from a shroud that wrapped the body helps identify the victim as a suburban honor student.
- DirectorBryan SpicerStarsEmily DeschanelDavid BoreanazMichaela ConlinSerial killer Howard Epps returns as he reaches out from prison in a deadly game involving Bones and Booth.
- DirectorSteven DePaulStarsEmily DeschanelDavid BoreanazMichaela ConlinA body is found in a tub filled with lye at a construction site, and Booth reexamines his feelings for his son's mother after they have a fling.
- DirectorKaren GaviolaStarsEmily DeschanelDavid BoreanazMichaela ConlinAn explosion at a hotel has the team exploring drug cartel connections and struggling with diplomatic immunity.
- DirectorThomas J. WrightStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen a girl's body is identified as a missing pageant queen, the investigation focuses on her parents.
- DirectorKate WoodsStarsEmily DeschanelDavid BoreanazMichaela ConlinA trip to Vegas to identify a body is complicated when a more recent body is found nearby.
- DirectorCraig Ross Jr.StarsEmily DeschanelDavid BoreanazMichaela ConlinWhen Hodgins and Brennan are buried alive, it's a race against time and a kidnapper who doesn't negotiate.
- DirectorTony WharmbyStarsEmily DeschanelDavid BoreanazMichaela ConlinThe headless skeleton of a young man is found in a state forest. Brennan and Booth's investigation becomes entangled in the local legend of a woman who was decapitated as a witch in the 1780s and is said to still haunt the forest.
- DirectorDavid DuchovnyStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth and Bones investigate a murder that is connected to Bones' father. Meanwhile, after obtaining his doctorate, Zack gets a makeover to appear more professional.
- DirectorJesús Salvador TreviñoStarsEmily DeschanelDavid BoreanazMichaela ConlinAfter Howard Epps orchestrates an escape from his penitentiary, he starts picking off the Jeffersonian team one by one and taunting Brennan with clues to save them.
- DirectorAllan KroekerStarsEmily DeschanelDavid BoreanazMichaela ConlinWhile Brennan is paired up with another FBI agent to solve the murder of a co-ed found inside an alligator in the Everglades, Booth is sent to therapy after shooting a clown-shaped speaker on an ice cream truck.
- DirectorDwight H. LittleStarsEmily DeschanelDavid BoreanazMichaela ConlinHodgins' lapse in judgment may cause a murderer to be set free, Brennan explores the world of dating, and Booth continues his therapy.
- DirectorCraig Ross Jr.StarsEmily DeschanelDavid BoreanazMichaela ConlinJust as Temperance is preparing to publicize her latest book, bodies start showing up that are eerily similar to the victims in her mystery novel.
- DirectorTony WharmbyStarsEmily DeschanelDavid BoreanazMichaela ConlinBones is called back from vacation - several times - after a boneless body is found, and Sully has a proposition.
- DirectorScott LautanenStarsEmily DeschanelDavid BoreanazMichaela ConlinWhen Booth and Brennan keep butting heads in a case involving a Catholic church, he convinces her to see Dr. Wyatt with him, and Hodgins suggest a change in his and Angela's relationship.
- DirectorJeff WoolnoughStarsEmily DeschanelDavid BoreanazMichaela ConlinBooth's investigation into a presumed dead hit man turns quite dangerous, and Brennan ends up turning to an unlikely source for help.
- DirectorJeannot SzwarcStarsEmily DeschanelDavid BoreanazMichaela ConlinBones and her team must determine how a man was flattened in a pasture when his injuries don't coincide with the theory of the crime.
- 2005–201742mTV-147.7 (1.1K)TV EpisodeDirectorCaleb DeschanelStarsEmily DeschanelDavid BoreanazMichaela ConlinHomeland security asks Bones to examine some remains, thinking they're radioactive, and although the site is cleared two questions remain: why was an up and coming chef murdered, and why are the bones still glowing?
- DirectorTony WharmbyStarsEmily DeschanelDavid BoreanazMichaela ConlinAs the wedding approaches, the team investigates the life/death of a little girl. Bones's father shows up, with an heirloom and a message from her mother.