When Veronica is making her eleventh hour appeal she is opposed by the Vice-President's lawyer. The VP would have no standing to argue against Veronica's motion; it would be up to the state to do so.
In the introduction, Veronica is on the pay phone with Nick and being told "I have information about Lincoln Burrows that could help you" when during that scene, Veronica and Nick were being threatened to stop looking into the case.
When Lincoln and Michael are playing gin rummy, Michael takes two turns in a row without Lincoln playing. When Lincoln exposes Michael's hand Michael only has seven cards. Playing gin he should have ten.