The first two seasons of Komiks followed a one-komiks-story-per-episode format, although some stories were aired for two episodes.
In the third season, they changed the format to one season per komiks story with the debut of Francisco V. Coching's "Da Adventures of Pedro Penduko". Because of the promising ratings, they extended Pedo Penduko for a second season. Pedro Penduko was extended for a third season, so the fifth season of Pedro Penduko was actually the show's fifth season. The Pedro Penduko finale was retitled "Si Pedro Penduko at ang mga Engkantao" with additional casts.